STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ24297.1Putative phage tail protein. (1296 aa)    
Predicted Functional Partners:
SCZ24272.1
TIGR02217 family protein.
 
 
   0.997
SCZ24279.1
Phage conserved hypothetical protein BR0599.
 
   0.997
SCZ24242.1
Phage major tail protein, TP901-1 family.
 
 
   0.982
SCZ24110.1
Phage portal protein, HK97 family.
 
 
   0.971
SCZ24171.1
Phage major capsid protein, HK97 family.
 
 
   0.970
SCZ24183.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
 
   0.970
SCZ24207.1
Protein of unknown function.
 
 
   0.958
SCZ24287.1
Putative phage cell wall peptidase, NlpC/P60 family.
 
     0.953
SCZ24263.1
Phage tail tape measure protein, lambda family.
 
     0.948
SCZ24195.1
Head-tail adaptor.
 
 
   0.925
Your Current Organism:
Afifella marina
NCBI taxonomy Id: 1120955
Other names: A. marina DSM 2698, Afifella marina DSM 2698
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.