STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ24351.1Signal transduction histidine kinase. (480 aa)    
Predicted Functional Partners:
SCZ39471.1
PAS domain S-box-containing protein.
   
 0.995
SCZ30955.1
PAS domain S-box-containing protein.
 
0.992
SCZ37487.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.989
SCZ44833.1
PAS domain S-box-containing protein.
   
 0.983
SCZ24342.1
Two-component system, OmpR family, response regulator.
 0.981
SCZ40514.1
PAS domain S-box-containing protein.
 
 
0.925
SCZ36762.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
  
 0.888
SCZ40626.1
PAS fold-containing protein.
 
 
 0.884
SCZ19975.1
Na+/proline symporter.
   
 0.867
SCZ44239.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase).
   
 0.770
Your Current Organism:
Afifella marina
NCBI taxonomy Id: 1120955
Other names: A. marina DSM 2698, Afifella marina DSM 2698
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.