STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ28397.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (250 aa)    
Predicted Functional Partners:
SCZ42140.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.927
SCZ39319.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.858
SCZ29246.1
Phosphocarrier protein FPr; Belongs to the PEP-utilizing enzyme family.
     
 0.763
SCZ40664.1
Predicted O-methyltransferase YrrM.
 
      0.650
SCZ37487.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.630
SCZ21036.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.617
SCZ40696.1
Enterobactin synthetase component F.
 
 0.574
SCZ42146.1
Thioesterase domain-containing protein.
  
 0.573
SCZ34304.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    
0.566
SCZ22674.1
Phosphotransacetylase.
  
 0.562
Your Current Organism:
Afifella marina
NCBI taxonomy Id: 1120955
Other names: A. marina DSM 2698, Afifella marina DSM 2698
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.