STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ32852.1Gamma-glutamylputrescine oxidase. (444 aa)    
Predicted Functional Partners:
SCZ24740.1
Sarcosine oxidase subunit alpha.
  
 0.972
SCZ25110.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.972
SCZ39319.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.834
SCZ20817.1
L-glutamine synthetase.
 
 
  0.801
SCZ39197.1
Putative glutamine amidotransferase.
 
  
 0.618
SCZ34538.1
Beta-alanine--pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
     0.601
SCZ19982.1
Beta-alanine--pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
     0.575
SCZ32844.1
Hypothetical protein.
       0.406
SCZ32848.1
Hypothetical protein.
       0.406
Your Current Organism:
Afifella marina
NCBI taxonomy Id: 1120955
Other names: A. marina DSM 2698, Afifella marina DSM 2698
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.