STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ37919.1Protein of unknown function. (1107 aa)    
Predicted Functional Partners:
SCZ45465.1
Sporulation related domain-containing protein.
  
     0.723
SCZ44476.1
Uncharacterized membrane protein.
  
     0.701
SCZ41945.1
Protein of unknown function.
  
     0.663
SCZ35071.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.651
SCZ37209.1
Outer membrane protein assembly factor BamE, lipoprotein component of the BamABCDE complex.
  
   
 0.648
SCZ44367.1
Cell division and transport-associated protein TolA.
  
     0.627
SCZ38929.1
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
     0.622
SCZ44595.1
Hypothetical protein.
  
     0.606
SCZ32095.1
AsmA family protein.
  
   
 0.605
SCZ37925.1
Peroxiredoxin Q/BCP.
       0.594
Your Current Organism:
Afifella marina
NCBI taxonomy Id: 1120955
Other names: A. marina DSM 2698, Afifella marina DSM 2698
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.