STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ40549.1Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. (476 aa)    
Predicted Functional Partners:
SCZ34588.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 0.922
SCZ40545.1
HEAT repeat.
 
     0.918
SCZ20197.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 
 0.863
SCZ40527.1
Hypothetical protein.
    
 0.856
SCZ40541.1
Outer membrane protein, YaiO family.
 
    0.842
SCZ40534.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 
     0.808
SCZ31712.1
Diguanylate cyclase/phosphodiesterase.
  
 
 0.788
SCZ39888.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.788
SCZ37163.1
Polysaccharide deacetylase.
  
 
 0.747
SCZ34564.1
Glycosyltransferase, GT2 family.
    
 0.730
Your Current Organism:
Afifella marina
NCBI taxonomy Id: 1120955
Other names: A. marina DSM 2698, Afifella marina DSM 2698
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