STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ40701.12,3-dihydro-2,3-dihydroxybenzoate dehydrogenase. (255 aa)    
Predicted Functional Partners:
SCZ40680.1
2,3-dihydroxybenzoate-AMP ligase.
 
  0.981
SCZ40686.1
Bifunctional isochorismate lyase / aryl carrier protein.
 
  0.979
SCZ40696.1
Enterobactin synthetase component F.
 
 0.970
SCZ40689.1
Aryl carrier domain-containing protein.
 
 
  0.954
SCZ40675.1
Isochorismate synthase.
 
    0.940
SCZ40707.1
Hypothetical protein.
 
     0.909
SCZ42140.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.896
SCZ39319.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.858
SCZ22552.1
Bifunctional isochorismate lyase / aryl carrier protein.
 
 
  0.804
SCZ29246.1
Phosphocarrier protein FPr; Belongs to the PEP-utilizing enzyme family.
     
 0.763
Your Current Organism:
Afifella marina
NCBI taxonomy Id: 1120955
Other names: A. marina DSM 2698, Afifella marina DSM 2698
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.