STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ41301.1Polar amino acid transport system permease protein. (219 aa)    
Predicted Functional Partners:
SCZ41307.1
Polar amino acid transport system permease protein.
 
 
 
0.944
SCZ41289.1
Polar amino acid transport system ATP-binding protein.
 
 0.913
SCZ41294.1
Polar amino acid transport system substrate-binding protein.
  0.911
SCZ25657.1
Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
  0.876
SCZ26303.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.870
SCZ21178.1
Polar amino acid transport system permease protein.
  
 
  0.846
SCZ26325.1
Octopine/nopaline transport system substrate-binding protein.
 
  0.826
SCZ34857.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
  0.793
SCZ34866.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  
  0.781
SCZ26210.1
General L-amino acid transport system ATP-binding protein.
 
  
  0.775
Your Current Organism:
Afifella marina
NCBI taxonomy Id: 1120955
Other names: A. marina DSM 2698, Afifella marina DSM 2698
Server load: low (18%) [HD]