STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ44762.1ABC-2 type transport system permease protein. (253 aa)    
Predicted Functional Partners:
SCZ44765.1
ABC-2 type transport system ATP-binding protein.
 
 0.981
SCZ28718.1
Ribosome-dependent ATPase.
  
 
 0.681
SCZ45711.1
Nitroreductase.
  
  
 0.648
SCZ44769.1
Homoprotocatechuate degradation operon regulator, HpaR.
       0.541
SCZ20843.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.539
SCZ35105.1
ABC-2 type transport system ATP-binding protein.
  
 
 0.530
SCZ36746.1
Glycine betaine/proline transport system substrate-binding protein.
  
  
  0.477
SCZ37746.1
CAAX protease self-immunity.
   
    0.454
SCZ44759.1
Meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase.
       0.447
SCZ32782.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
    
  0.445
Your Current Organism:
Afifella marina
NCBI taxonomy Id: 1120955
Other names: A. marina DSM 2698, Afifella marina DSM 2698
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.