Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D8Y24_05310 | carA | GCA_000425105_00786 | GCA_000425105_02447 | Unannotated protein. | Unannotated protein; Belongs to the CarA family. | 0.864 |
D8Y24_05310 | carB | GCA_000425105_00786 | GCA_000425105_02448 | Unannotated protein. | Unannotated protein; Belongs to the CarB family. | 0.820 |
D8Y24_05310 | guaA | GCA_000425105_00786 | GCA_000425105_02050 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.518 |
D8Y24_05310 | pyrB | GCA_000425105_00786 | GCA_000425105_02444 | Unannotated protein. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.947 |
D8Y24_05310 | pyrC | GCA_000425105_00786 | GCA_000425105_02445 | Unannotated protein. | Unannotated protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.935 |
D8Y24_05310 | pyrD | GCA_000425105_00786 | GCA_000425105_01928 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.743 |
D8Y24_05310 | pyrE | GCA_000425105_00786 | GCA_000425105_00243 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.790 |
D8Y24_05310 | pyrF | GCA_000425105_00786 | GCA_000425105_02449 | Unannotated protein. | Unannotated protein. | 0.836 |
D8Y24_05310 | pyrR | GCA_000425105_00786 | GCA_000425105_02443 | Unannotated protein. | Unannotated protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.947 |
carA | D8Y24_05310 | GCA_000425105_02447 | GCA_000425105_00786 | Unannotated protein; Belongs to the CarA family. | Unannotated protein. | 0.864 |
carA | carB | GCA_000425105_02447 | GCA_000425105_02448 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Belongs to the CarB family. | 0.999 |
carA | guaA | GCA_000425105_02447 | GCA_000425105_02050 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.533 |
carA | pyrB | GCA_000425105_02447 | GCA_000425105_02444 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
carA | pyrC | GCA_000425105_02447 | GCA_000425105_02445 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.999 |
carA | pyrD | GCA_000425105_02447 | GCA_000425105_01928 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.955 |
carA | pyrE | GCA_000425105_02447 | GCA_000425105_00243 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.953 |
carA | pyrF | GCA_000425105_02447 | GCA_000425105_02449 | Unannotated protein; Belongs to the CarA family. | Unannotated protein. | 0.990 |
carA | pyrR | GCA_000425105_02447 | GCA_000425105_02443 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.952 |
carB | D8Y24_05310 | GCA_000425105_02448 | GCA_000425105_00786 | Unannotated protein; Belongs to the CarB family. | Unannotated protein. | 0.820 |
carB | carA | GCA_000425105_02448 | GCA_000425105_02447 | Unannotated protein; Belongs to the CarB family. | Unannotated protein; Belongs to the CarA family. | 0.999 |
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