STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421565_00780Unannotated protein. (229 aa)    
Predicted Functional Partners:
GCA_000421565_00779
Unannotated protein.
 
 0.999
GCA_000421565_00783
Unannotated protein.
 
 
 0.999
GCA_000421565_00931
Unannotated protein.
 
 0.974
GCA_000421565_01658
Unannotated protein.
 
 0.973
GCA_000421565_00782
Unannotated protein.
 
     0.910
GCA_000421565_03208
Unannotated protein.
    
 0.821
GCA_000421565_00781
Unannotated protein.
       0.782
GCA_000421565_00930
Unannotated protein.
 
 
0.769
GCA_000421565_01657
Unannotated protein.
 
 
0.766
GCA_000421565_00164
Unannotated protein.
 
0.762
Your Current Organism:
Agromyces subbeticus
NCBI taxonomy Id: 1120960
Other names: A. subbeticus DSM 16689, Agromyces subbeticus DSM 16689
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.