STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421565_02052Unannotated protein. (277 aa)    
Predicted Functional Partners:
GCA_000421565_03050
Unannotated protein.
   
 
 0.796
GCA_000421565_03847
Unannotated protein.
   
   0.768
GCA_000421565_03596
Unannotated protein.
  
  0.760
GCA_000421565_02053
Unannotated protein.
 
     0.670
GCA_000421565_01035
Unannotated protein.
 
  
  0.629
GCA_000421565_00004
Unannotated protein.
   
  0.560
GCA_000421565_01179
Unannotated protein.
    
  0.549
GCA_000421565_01591
Unannotated protein.
   
   0.529
GCA_000421565_01651
Unannotated protein.
  
    0.529
GCA_000421565_03476
Unannotated protein.
   
   0.529
Your Current Organism:
Agromyces subbeticus
NCBI taxonomy Id: 1120960
Other names: A. subbeticus DSM 16689, Agromyces subbeticus DSM 16689
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.