STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421565_02783Unannotated protein. (2221 aa)    
Predicted Functional Partners:
GCA_000421565_01706
Unannotated protein.
  
  0.795
GCA_000421565_02661
Unannotated protein.
  
 
0.787
GCA_000421565_02662
Unannotated protein.
   
 0.771
GCA_000421565_01978
Unannotated protein.
  
 0.751
GCA_000421565_00983
Unannotated protein.
   
  0.738
GCA_000421565_02679
Unannotated protein.
   
  0.738
GCA_000421565_03473
Unannotated protein.
  
  
 0.721
GCA_000421565_00573
Unannotated protein.
  
  
 0.711
GCA_000421565_03472
Unannotated protein.
  
  
 0.709
GCA_000421565_00389
Unannotated protein.
  
  0.659
Your Current Organism:
Agromyces subbeticus
NCBI taxonomy Id: 1120960
Other names: A. subbeticus DSM 16689, Agromyces subbeticus DSM 16689
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.