STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374485_00785Unannotated protein. (540 aa)    
Predicted Functional Partners:
GCA_000374485_00783
Unannotated protein.
 
  
 0.873
GCA_000374485_00784
Unannotated protein.
  
  
 0.842
GCA_000374485_00333
Unannotated protein.
  
 
 
 0.719
GCA_000374485_00427
Unannotated protein.
  
  
  0.616
GCA_000374485_00782
Unannotated protein.
       0.608
GCA_000374485_00737
Unannotated protein.
    
 0.566
GCA_000374485_01714
Unannotated protein.
 
   
  0.552
GCA_000374485_01123
Unannotated protein.
 
 
 0.538
GCA_000374485_01646
Unannotated protein.
  
 
 
 0.531
GCA_000374485_00502
Unannotated protein.
 
 
 0.516
Your Current Organism:
Algicola sagamiensis
NCBI taxonomy Id: 1120963
Other names: A. sagamiensis DSM 14643, Algicola sagamiensis DSM 14643
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.