STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374485_00875Unannotated protein. (187 aa)    
Predicted Functional Partners:
GCA_000374485_01610
Unannotated protein.
 
 0.953
GCA_000374485_00741
Unannotated protein.
    
 0.915
GCA_000374485_01564
Unannotated protein.
    
 0.915
GCA_000374485_02420
Unannotated protein.
    
 0.915
GCA_000374485_02729
Unannotated protein.
    
  0.914
GCA_000374485_02760
Unannotated protein.
   
 
 0.911
GCA_000374485_02910
Unannotated protein.
    
 0.833
GCA_000374485_00876
Unannotated protein.
   
   0.821
GCA_000374485_00967
Unannotated protein.
    
  0.809
GCA_000374485_01355
Unannotated protein.
    
  0.809
Your Current Organism:
Algicola sagamiensis
NCBI taxonomy Id: 1120963
Other names: A. sagamiensis DSM 14643, Algicola sagamiensis DSM 14643
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.