STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374485_01421Unannotated protein. (293 aa)    
Predicted Functional Partners:
GCA_000374485_01494
Unannotated protein.
    
 0.931
GCA_000374485_03505
Unannotated protein.
    
 0.904
GCA_000374485_01845
Unannotated protein.
    
 0.872
GCA_000374485_01016
Unannotated protein.
    
 0.844
GCA_000374485_02780
Unannotated protein.
    
 0.821
GCA_000374485_02320
Unannotated protein.
    
 0.820
GCA_000374485_02842
Unannotated protein.
    
 0.820
GCA_000374485_03561
Unannotated protein.
 
   
 0.814
GCA_000374485_03565
Unannotated protein.
 
  
 0.804
GCA_000374485_00660
Unannotated protein.
     
 0.797
Your Current Organism:
Algicola sagamiensis
NCBI taxonomy Id: 1120963
Other names: A. sagamiensis DSM 14643, Algicola sagamiensis DSM 14643
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.