STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374485_01979Unannotated protein. (213 aa)    
Predicted Functional Partners:
GCA_000374485_01978
Unannotated protein.
       0.779
GCA_000374485_01977
Unannotated protein.
       0.773
GCA_000374485_01980
Unannotated protein.
       0.768
GCA_000374485_01981
Unannotated protein.
       0.768
GCA_000374485_01983
Unannotated protein.
       0.768
GCA_000374485_01982
Unannotated protein.
       0.760
GCA_000374485_01975
Unannotated protein.
       0.572
GCA_000374485_01976
Unannotated protein.
       0.572
GCA_000374485_01985
Unannotated protein.
       0.501
GCA_000374485_01986
Unannotated protein.
       0.501
Your Current Organism:
Algicola sagamiensis
NCBI taxonomy Id: 1120963
Other names: A. sagamiensis DSM 14643, Algicola sagamiensis DSM 14643
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.