STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374485_02526Unannotated protein. (300 aa)    
Predicted Functional Partners:
GCA_000374485_02525
Unannotated protein.
       0.733
GCA_000374485_03353
Unannotated protein.
  
 
 0.722
GCA_000374485_02524
Unannotated protein.
       0.718
GCA_000374485_02527
Unannotated protein.
       0.532
GCA_000374485_03056
Unannotated protein.
 
  
 0.530
GCA_000374485_00604
Unannotated protein.
     
 0.505
GCA_000374485_00953
Unannotated protein.
 
  
 0.467
GCA_000374485_02523
Unannotated protein.
       0.463
Your Current Organism:
Algicola sagamiensis
NCBI taxonomy Id: 1120963
Other names: A. sagamiensis DSM 14643, Algicola sagamiensis DSM 14643
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.