STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374485_02893Unannotated protein. (297 aa)    
Predicted Functional Partners:
GCA_000374485_00357
Unannotated protein.
  
     0.745
GCA_000374485_01791
Unannotated protein.
  
     0.642
GCA_000374485_02267
Unannotated protein.
  
     0.553
GCA_000374485_02304
Unannotated protein.
  
     0.532
GCA_000374485_02316
Unannotated protein.
     
 0.454
GCA_000374485_02093
Unannotated protein.
  
   
 0.437
GCA_000374485_03927
Unannotated protein.
  
     0.422
GCA_000374485_03823
Unannotated protein.
  
   
 0.421
GCA_000374485_02008
Unannotated protein.
  
     0.408
GCA_000374485_02059
Unannotated protein.
     
 0.401
Your Current Organism:
Algicola sagamiensis
NCBI taxonomy Id: 1120963
Other names: A. sagamiensis DSM 14643, Algicola sagamiensis DSM 14643
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.