STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374485_03097Unannotated protein. (587 aa)    
Predicted Functional Partners:
GCA_000374485_00611
Unannotated protein.
  
  
  0.800
GCA_000374485_01852
Unannotated protein.
  
     0.704
GCA_000374485_01656
Unannotated protein.
 
 
 0.701
GCA_000374485_02980
Unannotated protein.
  
     0.696
GCA_000374485_03254
Unannotated protein.
 
  
 0.676
GCA_000374485_01407
Unannotated protein.
 
     0.617
GCA_000374485_01850
Unannotated protein.
  
  
  0.617
GCA_000374485_03024
Unannotated protein.
  
 
 0.616
GCA_000374485_00376
Unannotated protein.
 
  0.574
GCA_000374485_01179
Unannotated protein.
    
 
 0.567
Your Current Organism:
Algicola sagamiensis
NCBI taxonomy Id: 1120963
Other names: A. sagamiensis DSM 14643, Algicola sagamiensis DSM 14643
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.