STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374485_03844Unannotated protein. (441 aa)    
Predicted Functional Partners:
GCA_000374485_02111
Unannotated protein.
    
  0.805
GCA_000374485_03550
Unannotated protein.
   
   0.703
GCA_000374485_03845
Unannotated protein.
       0.677
GCA_000374485_03843
Unannotated protein.
 
     0.642
GCA_000374485_03561
Unannotated protein.
   
 0.610
GCA_000374485_03842
Unannotated protein.
     
 0.551
GCA_000374485_03847
Unannotated protein.
  
 
 0.507
GCA_000374485_03846
Unannotated protein.
   
 
 0.486
GCA_000374485_01086
Unannotated protein.
 
     0.483
GCA_000374485_01124
Unannotated protein.
  
 0.482
Your Current Organism:
Algicola sagamiensis
NCBI taxonomy Id: 1120963
Other names: A. sagamiensis DSM 14643, Algicola sagamiensis DSM 14643
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.