STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001313265_00773Unannotated protein. (37 aa)    
Predicted Functional Partners:
GCA_001313265_07889
Unannotated protein.
  
 
 0.799
GCA_001313265_03346
Unannotated protein.
  
 0.788
GCA_001313265_00774
Unannotated protein.
       0.773
GCA_001313265_07888
Unannotated protein.
  
 
 0.750
GCA_001313265_07986
Unannotated protein.
  
 
 0.750
GCA_001313265_03592
Unannotated protein.
  
 0.747
GCA_001313265_03593
Unannotated protein.
  
 0.747
GCA_001313265_03595
Unannotated protein.
  
 0.747
GCA_001313265_07650
Unannotated protein.
  
 
 0.720
GCA_001313265_02473
Unannotated protein.
     
 0.674
Your Current Organism:
Algoriphagus boritolerans
NCBI taxonomy Id: 1120964
Other names: A. boritolerans DSM 17298 = JCM 18970, Algoriphagus boritolerans DSM 17298, Algoriphagus boritolerans DSM 17298 = JCM 18970, Algoriphagus boritolerans JCM 18970, Algoriphagus boritolerans JCM 18970 = DSM 17298
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.