STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001313265_05154Unannotated protein. (298 aa)    
Predicted Functional Partners:
GCA_001313265_04138
Unannotated protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
    
 0.789
GCA_001313265_04139
Unannotated protein.
    
 0.789
GCA_001313265_05155
Unannotated protein.
       0.773
GCA_001313265_01671
Unannotated protein.
  
  
  0.648
GCA_001313265_04483
Unannotated protein.
    
  0.642
GCA_001313265_04484
Unannotated protein.
    
  0.642
GCA_001313265_04485
Unannotated protein.
    
  0.642
GCA_001313265_04486
Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
  0.642
GCA_001313265_04487
Unannotated protein.
    
  0.642
GCA_001313265_07088
Unannotated protein.
 
  
 0.616
Your Current Organism:
Algoriphagus boritolerans
NCBI taxonomy Id: 1120964
Other names: A. boritolerans DSM 17298 = JCM 18970, Algoriphagus boritolerans DSM 17298, Algoriphagus boritolerans DSM 17298 = JCM 18970, Algoriphagus boritolerans JCM 18970, Algoriphagus boritolerans JCM 18970 = DSM 17298
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.