STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001313265_07603Unannotated protein. (250 aa)    
Predicted Functional Partners:
GCA_001313265_07604
Unannotated protein.
 
 0.968
GCA_001313265_01365
Unannotated protein.
   
 
  0.578
GCA_001313265_01370
Unannotated protein.
   
 
  0.578
GCA_001313265_03746
Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.576
GCA_001313265_03747
Unannotated protein.
     
 0.576
GCA_001313265_03748
Unannotated protein.
     
 0.576
GCA_001313265_03749
Unannotated protein.
     
 0.576
GCA_001313265_03750
Unannotated protein.
     
 0.576
GCA_001313265_07267
Unannotated protein.
   
 
 0.565
GCA_001313265_07268
Unannotated protein.
   
 
 0.565
Your Current Organism:
Algoriphagus boritolerans
NCBI taxonomy Id: 1120964
Other names: A. boritolerans DSM 17298 = JCM 18970, Algoriphagus boritolerans DSM 17298, Algoriphagus boritolerans DSM 17298 = JCM 18970, Algoriphagus boritolerans JCM 18970, Algoriphagus boritolerans JCM 18970 = DSM 17298
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