STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429405_00480Unannotated protein. (413 aa)    
Predicted Functional Partners:
GCA_000429405_00482
Unannotated protein.
 
     0.851
GCA_000429405_00481
Unannotated protein.
       0.773
GCA_000429405_03344
Unannotated protein.
    
  0.583
GCA_000429405_00479
Unannotated protein.
       0.536
GCA_000429405_00478
Unannotated protein.
       0.466
GCA_000429405_00514
Unannotated protein.
  
     0.430
GCA_000429405_00483
Unannotated protein.
       0.426
GCA_000429405_00326
Unannotated protein.
   
    0.420
GCA_000429405_01644
Unannotated protein.
   
    0.420
Your Current Organism:
Algoriphagus marincola DSM 16067
NCBI taxonomy Id: 1120966
Other names: A. marincola DSM 16067
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.