STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429445_02197Unannotated protein. (118 aa)    
Predicted Functional Partners:
GCA_000429445_00759
Unannotated protein.
    
   0.782
GCA_000429445_02198
Unannotated protein.
       0.782
GCA_000429445_02196
Unannotated protein.
       0.777
GCA_000429445_04267
Unannotated protein.
    
  0.527
GCA_000429445_01544
Unannotated protein.
    
  0.402
GCA_000429445_04269
Unannotated protein.
    
  0.402
Your Current Organism:
Algoriphagus terrigena
NCBI taxonomy Id: 1120967
Other names: A. terrigena DSM 22685, Algoriphagus terrigena DSM 22685
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.