STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429465_00128Unannotated protein. (218 aa)    
Predicted Functional Partners:
GCA_000429465_03221
Unannotated protein.
    
 0.889
GCA_000429465_02292
Unannotated protein.
   
 0.855
GCA_000429465_00842
Unannotated protein.
   
 0.773
GCA_000429465_01659
Unannotated protein.
  
 0.756
GCA_000429465_03408
Unannotated protein.
    
 0.745
GCA_000429465_03279
Unannotated protein.
   
 0.742
GCA_000429465_03407
Unannotated protein.
    
 
 0.732
GCA_000429465_03441
Unannotated protein.
    
   0.732
GCA_000429465_03464
Unannotated protein.
    
   0.692
GCA_000429465_03557
Unannotated protein.
   
 0.677
Your Current Organism:
Algoriphagus vanfongensis
NCBI taxonomy Id: 1120968
Other names: A. vanfongensis DSM 17529, Algoriphagus vanfongensis DSM 17529
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.