STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429485_00296Unannotated protein. (452 aa)    
Predicted Functional Partners:
GCA_000429485_00297
Unannotated protein.
 0.992
GCA_000429485_02702
Unannotated protein.
  
 0.949
GCA_000429485_01365
Unannotated protein.
  
0.905
GCA_000429485_04039
Unannotated protein.
  
0.897
GCA_000429485_03128
Unannotated protein.
 
 
 0.872
GCA_000429485_03036
Unannotated protein.
 
 
0.871
GCA_000429485_03310
Unannotated protein.
 
  
 0.856
GCA_000429485_01874
Unannotated protein.
 0.853
GCA_000429485_03855
Unannotated protein.
  
 0.853
GCA_000429485_00689
Unannotated protein.
  
 0.846
Your Current Organism:
Aliagarivorans marinus
NCBI taxonomy Id: 1120969
Other names: A. marinus DSM 23064, Aliagarivorans marinus DSM 23064
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.