STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429485_00838Unannotated protein. (343 aa)    
Predicted Functional Partners:
GCA_000429485_00839
Unannotated protein.
    
  0.740
GCA_000429485_02597
Unannotated protein.
 
  
 0.669
GCA_000429485_01690
Unannotated protein.
  
  
 0.613
GCA_000429485_01141
Unannotated protein.
   
 
  0.580
GCA_000429485_00425
Unannotated protein.
    
  0.539
GCA_000429485_01337
Unannotated protein.
    
  0.470
GCA_000429485_02800
Unannotated protein.
    
  0.470
GCA_000429485_01729
Unannotated protein.
  
  
 0.452
GCA_000429485_01476
Unannotated protein.
    
  0.449
GCA_000429485_00837
Unannotated protein.
       0.448
Your Current Organism:
Aliagarivorans marinus
NCBI taxonomy Id: 1120969
Other names: A. marinus DSM 23064, Aliagarivorans marinus DSM 23064
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.