STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429485_02773Unannotated protein. (342 aa)    
Predicted Functional Partners:
GCA_000429485_03043
Unannotated protein.
   
 0.892
GCA_000429485_00685
Unannotated protein.
    
 
 0.770
GCA_000429485_02352
Unannotated protein.
    
 
 0.770
GCA_000429485_00172
Unannotated protein.
    
 0.656
GCA_000429485_01486
Unannotated protein.
    
 0.656
GCA_000429485_01172
Unannotated protein.
   
 
 0.530
GCA_000429485_03306
Unannotated protein.
   
 
 0.530
GCA_000429485_02494
Unannotated protein.
    
   0.516
GCA_000429485_00843
Unannotated protein.
    
   0.507
GCA_000429485_00038
Unannotated protein.
    
   0.499
Your Current Organism:
Aliagarivorans marinus
NCBI taxonomy Id: 1120969
Other names: A. marinus DSM 23064, Aliagarivorans marinus DSM 23064
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.