STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429485_03224Unannotated protein. (339 aa)    
Predicted Functional Partners:
GCA_000429485_03865
Unannotated protein.
  
  
 0.713
GCA_000429485_04156
Unannotated protein.
  
 
 0.644
GCA_000429485_03489
Unannotated protein.
      0.638
GCA_000429485_03223
Unannotated protein.
   
   0.591
GCA_000429485_00460
Unannotated protein.
  
 
  0.574
GCA_000429485_01961
Unannotated protein.
 
  
 0.522
GCA_000429485_04327
Unannotated protein.
  
    0.522
GCA_000429485_02767
Unannotated protein.
      0.505
GCA_000429485_02272
Unannotated protein.
  
 
 0.489
GCA_000429485_00938
Unannotated protein.
  
  
 0.470
Your Current Organism:
Aliagarivorans marinus
NCBI taxonomy Id: 1120969
Other names: A. marinus DSM 23064, Aliagarivorans marinus DSM 23064
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.