STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429525_01620Unannotated protein. (346 aa)    
Predicted Functional Partners:
GCA_000429525_01621
Unannotated protein.
  
  
 0.875
GCA_000429525_01622
Unannotated protein.
  
    0.849
GCA_000429525_01618
Unannotated protein.
  
  
 0.787
GCA_000429525_00400
Unannotated protein.
  
  
 0.782
GCA_000429525_01619
Unannotated protein.
  
  
 0.762
GCA_000429525_01617
Unannotated protein.
  
  
 0.727
GCA_000429525_01623
Unannotated protein.
 
  
 0.707
GCA_000429525_00770
Unannotated protein.
 
  
 0.689
GCA_000429525_01625
Unannotated protein.
  
   0.682
GCA_000429525_01810
Unannotated protein.
 
   
 0.675
Your Current Organism:
Alicyclobacillus contaminans
NCBI taxonomy Id: 1120971
Other names: A. contaminans DSM 17975, Alicyclobacillus contaminans DSM 17975
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.