STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429525_02145Unannotated protein. (293 aa)    
Predicted Functional Partners:
GCA_000429525_02144
Unannotated protein.
 
  
 0.983
GCA_000429525_02146
Unannotated protein.
  
  
 0.870
GCA_000429525_02141
Unannotated protein.
 
     0.840
GCA_000429525_02143
Unannotated protein.
  
  
 0.821
GCA_000429525_02142
Unannotated protein.
  
  
 0.791
GCA_000429525_00481
Unannotated protein.
  
     0.769
GCA_000429525_01632
Unannotated protein.
  
     0.768
GCA_000429525_00774
Unannotated protein.
  
     0.761
GCA_000429525_02846
Unannotated protein.
  
     0.761
GCA_000429525_03291
Unannotated protein.
  
     0.736
Your Current Organism:
Alicyclobacillus contaminans
NCBI taxonomy Id: 1120971
Other names: A. contaminans DSM 17975, Alicyclobacillus contaminans DSM 17975
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.