STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000430585_01161Unannotated protein. (718 aa)    
Predicted Functional Partners:
GCA_000430585_02270
Unannotated protein.
 0.984
GCA_000430585_02268
Unannotated protein.
 0.979
GCA_000430585_01250
Unannotated protein.
 0.974
GCA_000430585_01254
Unannotated protein.
 
 0.967
GCA_000430585_00538
Unannotated protein.
 
 
 0.882
GCA_000430585_00539
Unannotated protein.
 
 
 0.839
GCA_000430585_02963
Unannotated protein.
 
 
 0.833
GCA_000430585_00010
Unannotated protein.
 
 
 0.828
GCA_000430585_01258
Unannotated protein.
 
 0.807
GCA_000430585_02061
Unannotated protein.
 
 
 0.775
Your Current Organism:
Alicyclobacillus herbarius
NCBI taxonomy Id: 1120972
Other names: A. herbarius DSM 13609, Alicyclobacillus herbarius DSM 13609
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.