STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000430585_01825Unannotated protein. (262 aa)    
Predicted Functional Partners:
GCA_000430585_01826
Unannotated protein.
 
  
 0.982
GCA_000430585_01824
Unannotated protein.
  
  
 0.903
GCA_000430585_01823
Unannotated protein.
 
    0.885
GCA_000430585_01790
Unannotated protein.
 
  
 0.873
GCA_000430585_01687
Unannotated protein.
 
  
 0.861
GCA_000430585_02960
Unannotated protein.
    
 0.837
GCA_000430585_01828
Unannotated protein.
 
  
 0.832
GCA_000430585_02182
Unannotated protein.
  
  
 0.777
GCA_000430585_01827
Unannotated protein.
 
  
 0.769
GCA_000430585_02399
Unannotated protein.
    
 0.757
Your Current Organism:
Alicyclobacillus herbarius
NCBI taxonomy Id: 1120972
Other names: A. herbarius DSM 13609, Alicyclobacillus herbarius DSM 13609
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.