STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000430585_02040Unannotated protein. (200 aa)    
Predicted Functional Partners:
GCA_000430585_01076
Unannotated protein.
 
    0.653
GCA_000430585_00725
Unannotated protein.
  
    0.642
GCA_000430585_01805
Unannotated protein.
  
     0.613
GCA_000430585_00362
Unannotated protein.
  
    0.607
GCA_000430585_00360
Unannotated protein.
  
     0.587
GCA_000430585_00506
Unannotated protein.
  
     0.583
GCA_000430585_02039
Unannotated protein.
       0.565
GCA_000430585_02041
Unannotated protein.
 
     0.547
GCA_000430585_00363
Unannotated protein.
  
     0.544
GCA_000430585_00271
Unannotated protein.
  
     0.539
Your Current Organism:
Alicyclobacillus herbarius
NCBI taxonomy Id: 1120972
Other names: A. herbarius DSM 13609, Alicyclobacillus herbarius DSM 13609
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.