STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000430585_02464Unannotated protein. (213 aa)    
Predicted Functional Partners:
GCA_000430585_01737
Unannotated protein.
  
     0.756
GCA_000430585_01778
Unannotated protein.
  
     0.754
GCA_000430585_02072
Unannotated protein.
  
     0.754
GCA_000430585_00154
Unannotated protein.
  
     0.748
GCA_000430585_01908
Unannotated protein.
  
     0.725
GCA_000430585_00742
Unannotated protein.
  
     0.714
GCA_000430585_01780
Unannotated protein.
  
     0.691
GCA_000430585_01777
Unannotated protein.
  
     0.672
GCA_000430585_01462
Unannotated protein.
  
     0.666
GCA_000430585_01775
Unannotated protein.
  
     0.654
Your Current Organism:
Alicyclobacillus herbarius
NCBI taxonomy Id: 1120972
Other names: A. herbarius DSM 13609, Alicyclobacillus herbarius DSM 13609
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.