STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000430585_02894Unannotated protein. (159 aa)    
Predicted Functional Partners:
GCA_000430585_02895
Unannotated protein.
 
    0.966
GCA_000430585_02896
Unannotated protein.
 
     0.877
GCA_000430585_02893
Unannotated protein.
 
  
 0.875
GCA_000430585_01409
Unannotated protein.
 
    0.855
GCA_000430585_02065
Unannotated protein.
 
    0.852
GCA_000430585_02066
Unannotated protein.
  
     0.774
GCA_000430585_00099
Unannotated protein.
  
     0.604
GCA_000430585_02583
Unannotated protein.
  
     0.537
GCA_000430585_02892
Unannotated protein.
       0.523
GCA_000430585_01030
Unannotated protein.
  
     0.522
Your Current Organism:
Alicyclobacillus herbarius
NCBI taxonomy Id: 1120972
Other names: A. herbarius DSM 13609, Alicyclobacillus herbarius DSM 13609
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.