STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000430585_03138Unannotated protein. (394 aa)    
Predicted Functional Partners:
GCA_000430585_03136
Unannotated protein.
 
 
 0.982
GCA_000430585_03137
Unannotated protein.
 
 
 
0.969
GCA_000430585_00841
Unannotated protein.
 
 
 0.894
GCA_000430585_00326
Unannotated protein.
  
  
  0.889
GCA_000430585_00212
Unannotated protein.
 
 
 0.869
GCA_000430585_00840
Unannotated protein.
  
  
  0.865
GCA_000430585_03218
Unannotated protein.
 
 
 0.865
GCA_000430585_00325
Unannotated protein.
 
 
  0.861
GCA_000430585_01519
Unannotated protein.
  
 
  0.846
GCA_000430585_00197
Unannotated protein.
  
 
 0.837
Your Current Organism:
Alicyclobacillus herbarius
NCBI taxonomy Id: 1120972
Other names: A. herbarius DSM 13609, Alicyclobacillus herbarius DSM 13609
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.