STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376225_00654Unannotated protein. (180 aa)    
Predicted Functional Partners:
GCA_000376225_00228
Unannotated protein.
  
     0.773
GCA_000376225_00655
Unannotated protein.
       0.773
GCA_000376225_01204
Unannotated protein.
    
 0.752
GCA_000376225_01203
Unannotated protein.
    
 0.748
GCA_000376225_01240
Unannotated protein.
    
 0.730
GCA_000376225_02832
Unannotated protein.
    
 0.730
GCA_000376225_01407
Unannotated protein.
 
 
 0.720
GCA_000376225_02298
Unannotated protein.
  
 
 0.656
GCA_000376225_03139
Unannotated protein.
    
   0.634
GCA_000376225_02723
Unannotated protein.
  
 
  0.530
Your Current Organism:
Effusibacillus pohliae
NCBI taxonomy Id: 1120973
Other names: Alicyclobacillus pohliae DSM 22757, E. pohliae DSM 22757, Effusibacillus pohliae DSM 22757
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.