STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376225_00762Unannotated protein. (244 aa)    
Predicted Functional Partners:
GCA_000376225_02763
Unannotated protein.
 
     0.608
GCA_000376225_00761
Unannotated protein.
       0.606
GCA_000376225_01928
Unannotated protein.
 
     0.588
GCA_000376225_03115
Unannotated protein.
  
     0.573
GCA_000376225_01383
Unannotated protein.
 
  
 0.569
GCA_000376225_02680
Unannotated protein.
  
     0.559
GCA_000376225_00524
Unannotated protein.
 
     0.556
GCA_000376225_01852
Unannotated protein.
 
  
 0.555
GCA_000376225_01851
Unannotated protein.
 
  
 0.548
GCA_000376225_02589
Unannotated protein.
 
     0.548
Your Current Organism:
Effusibacillus pohliae
NCBI taxonomy Id: 1120973
Other names: Alicyclobacillus pohliae DSM 22757, E. pohliae DSM 22757, Effusibacillus pohliae DSM 22757
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.