STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376225_03016Unannotated protein. (932 aa)    
Predicted Functional Partners:
GCA_000376225_02341
Unannotated protein.
 
 0.880
GCA_000376225_01233
Unannotated protein.
   
 0.865
GCA_000376225_02326
Unannotated protein.
   
 0.863
GCA_000376225_01200
Unannotated protein.
   
 0.862
GCA_000376225_03436
Unannotated protein.
   
  0.858
GCA_000376225_01213
Unannotated protein.
    
 0.843
GCA_000376225_01229
Unannotated protein.
   
  0.837
GCA_000376225_01205
Unannotated protein.
    
  0.815
GCA_000376225_02434
Unannotated protein.
    
  0.815
GCA_000376225_02101
Unannotated protein.
  
 0.813
Your Current Organism:
Effusibacillus pohliae
NCBI taxonomy Id: 1120973
Other names: Alicyclobacillus pohliae DSM 22757, E. pohliae DSM 22757, Effusibacillus pohliae DSM 22757
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.