STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE33397.1Thioredoxin. (106 aa)    
Predicted Functional Partners:
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.745
SHE66840.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
     
 0.647
SHE33434.1
Nitroreductase.
  
   0.613
SHE62730.1
Thioredoxin reductase (NADPH).
  
 0.613
SHE69024.1
Thioredoxin reductase (NADPH).
  
 0.613
SHE87754.1
Dihydrolipoamide dehydrogenase.
  
 
 0.558
SHE33361.1
Thioredoxin-like [2Fe-2S] ferredoxin.
       0.539
SHE46897.1
Thioredoxin reductase.
  
 0.539
SHE68667.1
Thioredoxin reductase.
  
 0.539
SHF10427.1
NADH dehydrogenase.
 
 
 0.529
Your Current Organism:
Alkalibacter saccharofermentans
NCBI taxonomy Id: 1120975
Other names: A. saccharofermentans DSM 14828, Alkalibacter saccharofermentans DSM 14828
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