STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE33924.1Transcriptional antiterminator. (670 aa)    
Predicted Functional Partners:
SHE33888.1
PTS system IIA component, Fru family (TC 4.A.2).
 
0.999
SHE38973.1
PTS system, glucose-specific IIC component.
 
 0.971
SHF06331.1
PTS system, mannitol-specific IIC component.
 
 
 0.964
SHF11817.1
PTS system, mannitol-specific IIC component.
 
 
 0.961
SHE30975.1
PTS system maltose-specific IIB component, Glc family /PTS system maltose-specific IIC component, Glc family.
 
 0.908
SHF18024.1
Transcriptional antiterminator.
 
 
0.904
SHE74636.1
Lichenan operon transcriptional antiterminator.
 
 
0.903
SHE61945.1
Transcriptional antiterminator, BglG family.
 
 
0.898
SHF06360.1
Transcriptional antiterminator, BglG family.
 
 
0.898
mtlD
Mannitol-1-phosphate 5-dehydrogenase.
 
 0.875
Your Current Organism:
Alkalibacter saccharofermentans
NCBI taxonomy Id: 1120975
Other names: A. saccharofermentans DSM 14828, Alkalibacter saccharofermentans DSM 14828
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.