STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE45214.12,3-diketo-5-methylthiopentyl-1-phosphate enolase; Belongs to the RuBisCO large chain family. (434 aa)    
Predicted Functional Partners:
SHE74430.1
Cupin domain-containing protein.
     0.706
SHE85483.1
L-fuculose-phosphate aldolase.
  
 
 0.579
SHE45248.1
L-iditol 2-dehydrogenase.
       0.568
SHE41761.1
Phosphoglycolate phosphatase.
  
  
 0.519
SHE45279.1
Hypothetical protein.
    
  0.491
SHE45313.1
Hypothetical protein.
    
  0.478
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
       0.450
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
       0.450
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
     
 0.438
SHF04237.1
Phosphoglycolate phosphatase.
     
 0.438
Your Current Organism:
Alkalibacter saccharofermentans
NCBI taxonomy Id: 1120975
Other names: A. saccharofermentans DSM 14828, Alkalibacter saccharofermentans DSM 14828
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