STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE66475.1Integral membrane protein TIGR01906. (230 aa)    
Predicted Functional Partners:
tsaD
N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
       0.827
SHE66546.1
Poly-gamma-glutamate synthesis protein (capsule biosynthesis protein).
 
     0.802
SHE66511.1
[SSU ribosomal protein S18P]-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
       0.784
SHE66676.1
C_GCAxxG_C_C family probable redox protein.
 
     0.702
SHE66574.1
His Kinase A (phospho-acceptor) domain-containing protein.
       0.682
SHE66606.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
       0.682
SHE66777.1
N6-L-threonylcarbamoyladenine synthase.
       0.547
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.538
SHE66810.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE.
       0.526
SHE94925.1
Protein of unknown function.
  
     0.525
Your Current Organism:
Alkalibacter saccharofermentans
NCBI taxonomy Id: 1120975
Other names: A. saccharofermentans DSM 14828, Alkalibacter saccharofermentans DSM 14828
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