STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE66840.15-methyltetrahydrofolate--homocysteine methyltransferase. (574 aa)    
Predicted Functional Partners:
SHE34514.1
5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.
 
 
 0.997
SHF15295.1
Methanogenic corrinoid protein MtbC1.
 
 0.995
SHE94141.1
Methylenetetrahydrofolate reductase (NADPH).
 
 
 0.994
SHE89855.1
Methanogenic corrinoid protein MtbC1.
 
 0.993
SHE98725.1
methylmalonyl-CoA mutase C-terminal domain-containing protein.
 
 0.993
SHE94459.1
Methanogenic corrinoid protein MtbC1.
 
 0.992
SHE45415.1
Cystathionine beta-lyase.
  
 
 0.937
SHF14532.1
Cystathionine gamma-synthase.
  
 
 0.937
SHF10119.1
Homoserine dehydrogenase.
 
 
 0.936
SHE66676.1
C_GCAxxG_C_C family probable redox protein.
    
 0.930
Your Current Organism:
Alkalibacter saccharofermentans
NCBI taxonomy Id: 1120975
Other names: A. saccharofermentans DSM 14828, Alkalibacter saccharofermentans DSM 14828
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