STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE75110.12-dehydro-3-deoxygluconokinase. (315 aa)    
Predicted Functional Partners:
SHE75542.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
 
 0.959
SHE80633.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
 
 0.937
SHE33888.1
PTS system IIA component, Fru family (TC 4.A.2).
  
 
 0.865
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.835
SHE76244.1
D-altronate dehydratase.
  
 
 0.834
SHE32388.1
Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.828
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 
 0.787
SHE40404.1
Ribose 5-phosphate isomerase B.
  
 
 0.733
SHE30030.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
 
 0.730
SHE92596.1
CBS domain-containing protein.
  
 
  0.719
Your Current Organism:
Alkalibacter saccharofermentans
NCBI taxonomy Id: 1120975
Other names: A. saccharofermentans DSM 14828, Alkalibacter saccharofermentans DSM 14828
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