STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ07986.1Hypothetical protein. (147 aa)    
Predicted Functional Partners:
efp
Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.900
SCY39141.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
  0.842
SCZ08288.1
Pyruvate ferredoxin oxidoreductase alpha subunit.
  
 
  0.672
SCZ08497.1
AAA domain-containing protein.
  
     0.636
SCZ08297.1
Pyruvate ferredoxin oxidoreductase gamma subunit.
  
 
  0.624
SCY66917.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
  0.590
SCY56834.1
Predicted acetyltransferase.
  
     0.576
SCZ11226.1
Hypothetical protein.
  
     0.568
SCZ10562.1
Transposase.
  
     0.520
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
    0.468
Your Current Organism:
Alkaliphilus peptidifermentans
NCBI taxonomy Id: 1120976
Other names: A. peptidifermentans DSM 18978, Alkaliphilus peptidifermentans DSM 18978
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.