Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCY26150.1 | SCY26700.1 | SAMN03080606_01154 | SAMN03080606_01168 | SNF2 family N-terminal domain-containing protein. | Superfamily II DNA or RNA helicase. | 0.853 |
| SCY26150.1 | SCY62982.1 | SAMN03080606_01154 | SAMN03080606_02020 | SNF2 family N-terminal domain-containing protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.973 |
| SCY26150.1 | SCY97084.1 | SAMN03080606_01154 | SAMN03080606_03323 | SNF2 family N-terminal domain-containing protein. | DNA repair exonuclease SbcCD nuclease subunit. | 0.620 |
| SCY26150.1 | SCZ10268.1 | SAMN03080606_01154 | SAMN03080606_04270 | SNF2 family N-terminal domain-containing protein. | ATP-dependent DNA helicase DinG. | 0.814 |
| SCY26150.1 | polA | SAMN03080606_01154 | SAMN03080606_00776 | SNF2 family N-terminal domain-containing protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.974 |
| SCY26150.1 | rpoA | SAMN03080606_01154 | SAMN03080606_04165 | SNF2 family N-terminal domain-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.975 |
| SCY26150.1 | rpoB | SAMN03080606_01154 | SAMN03080606_04220 | SNF2 family N-terminal domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.975 |
| SCY26150.1 | rpoZ | SAMN03080606_01154 | SAMN03080606_02761 | SNF2 family N-terminal domain-containing protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.975 |
| SCY26150.1 | sbcD | SAMN03080606_01154 | SAMN03080606_01720 | SNF2 family N-terminal domain-containing protein. | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.629 |
| SCY26150.1 | topA | SAMN03080606_01154 | SAMN03080606_00927 | SNF2 family N-terminal domain-containing protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.650 |
| SCY26700.1 | SCY26150.1 | SAMN03080606_01168 | SAMN03080606_01154 | Superfamily II DNA or RNA helicase. | SNF2 family N-terminal domain-containing protein. | 0.853 |
| SCY26700.1 | SCY62982.1 | SAMN03080606_01168 | SAMN03080606_02020 | Superfamily II DNA or RNA helicase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.731 |
| SCY26700.1 | SCZ10268.1 | SAMN03080606_01168 | SAMN03080606_04270 | Superfamily II DNA or RNA helicase. | ATP-dependent DNA helicase DinG. | 0.975 |
| SCY26700.1 | polA | SAMN03080606_01168 | SAMN03080606_00776 | Superfamily II DNA or RNA helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.979 |
| SCY26700.1 | rpoA | SAMN03080606_01168 | SAMN03080606_04165 | Superfamily II DNA or RNA helicase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.972 |
| SCY26700.1 | rpoB | SAMN03080606_01168 | SAMN03080606_04220 | Superfamily II DNA or RNA helicase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.974 |
| SCY26700.1 | rpoZ | SAMN03080606_01168 | SAMN03080606_02761 | Superfamily II DNA or RNA helicase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.972 |
| SCY62982.1 | SCY26150.1 | SAMN03080606_02020 | SAMN03080606_01154 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | SNF2 family N-terminal domain-containing protein. | 0.973 |
| SCY62982.1 | SCY26700.1 | SAMN03080606_02020 | SAMN03080606_01168 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Superfamily II DNA or RNA helicase. | 0.731 |
| SCY62982.1 | SCY97084.1 | SAMN03080606_02020 | SAMN03080606_03323 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA repair exonuclease SbcCD nuclease subunit. | 0.684 |
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